Release Notes for 1.1.20

I took version 1.1.19 to Cold Spring Harbor and used it for my tutorial. There were 26 issues arising, including one crash. A very useful exercise for Coot - thank you participants.

  • FEATURE: “New Residue Type” now available in Add Other Solvents dialog.

  • FEATURE: key-binding for Triple-Refine AA (H)

  • FEATURE: key-binding for Undo Symmetry View (Shift V)

  • FEATURE: key-binding for Keyboard Mutate (Shift-M)

  • FEATURE: now Open Dialogs track the latest used directory

  • FEATURE: “Unhappy Atom” markup added

  • FEATURE: Add keyboard mutate

  • FEATURE: on initial startup, Coot will ask if left-mouse should be used for view rotation

  • FEATURE: (Multi) Pick Delete Atom added

  • FEATURE: Bad Non-bonded contact markers now have dashed lines between the atoms

  • FEATURE: The space group info is now displayed in log on reading a coordinates file

  • FEATURE: Now configuration with –sound works

  • FEATURE: Other types of Carbohydrate added (back)

  • FEATURE: server mode turned into JSON RPC server

  • CHANGE: XDG is used for the download of COD entries

  • CHANGE: Update the “No Unmodelled Blobs” dialog

  • CHANGE: Update the url for AlphaFold models to v6

  • CHANGE: User-feedback when trying to rotate unselected chi angle improved

  • CHANGE: Cross-hairs have fixed size, not relative size - the size is configurable in Preferences

  • CHANGE: “Environment Distances” is now a transient [Oliver Clarke]

  • CHANGE: CA Label now follow the residue on “Space” repositioning

  • CHANGE: Recentre on new fragment on “Copy Fragment”

  • CHANGE: Overlay notification on B-factor and Occupancy updated

  • CHANGE: B-factor and Occupancy modification now has an overlay notifier

  • BUG-FIX: “Undo molecule” dialog operation fixed

  • BUG-FIX: Display Control dialog is only displayed on restart if it was displayed on session save

  • BUG-FIX: fix control of display control dialog in the state script

  • BUG-FIX: fix missing protein-ligand interactions for FLEV [thanks Lan Guan]

  • BUG-FIX: set_molecule_name() function for models fixed

  • BUG-FIX: one can now no longer pick/drag undisplayed intermediate hydrogen atoms [thanks Oliver Clarke]

  • BUG-FIX: the “No Unmodelled blobs” dialog tided up

  • BUG-FIX: get-monomer dialog activate now closes the drop-down.

  • BUG-FIX: undisplay “Get monomer” frame on entry activate

Chapi/libcootapi

  • NEW FUNCTION: get_mmrrcc()

  • NEW FUNCTION: get_residue_pucker_info() function added